Silva, G. A. et al. Biological performance and oviposition preference of tomato pinworm Tuta absoluta when offered a range of Solanaceous host plants. Sci. Rep. 11, 1153 (2021).
Google ScholarÂ
Bacci, L. et al. Natural mortality factors of tomato leafminer Tuta absoluta in open-field tomato crops in South America. Pest. Manag. Sci. 75, 736â743 (2019).
Google ScholarÂ
Guedes, R. N. C. & Siqueira, H. A. A. The tomato borer Tuta absoluta: Insecticide resistance and control failure. CAB Rev. Perspect. Agric. Vet. Sci. Nutr. Nat. Resour. 7, 1â7 (2012).
Guedes, R. N. C. et al. Insecticide resistance in the tomato pinworm Tuta absoluta: Patterns, spread, mechanisms, management and outlook. J. Pest. Sci. (2004) 92, 1329â1342 (2019).
Google ScholarÂ
Guedes, R. N. C. Insecticide resistance, control failure likelihood and the First Law of Geography. Pest. Manag. Sci. 73, 479â484 (2017).
Google ScholarÂ
Sparks, T. C. & Nauen, R. IRAC: Mode of action classification and insecticide resistance management. Pestic. Biochem. Physiol. 121, 122â128 (2015).
Google ScholarÂ
Yu, S. J. The Toxicology and Biochemistry of Insecticides. The Toxicology and Biochemistry of Insecticides (Taylor & Francis Group, 2015). https://doi.org/10.1201/b18164.
Jansson, R. K. et al. Emamectin benzoate: A novel avermectin derivative for control of lepidopterous pests. In Proceedings of the 3rd International Workshop on Management of Diamondback Moth and Other Crucifer Pests. Vegetable Pest management. 171â177 (1997).
Jeanguenat, A. The story of a new insecticidal chemistry class: The diamides. Pest Manag. Sci. 69, 7â14. https://doi.org/10.1002/ps.3406 (2013).
Google ScholarÂ
Haddi, K. et al. Mutation in the ace-1 gene of the tomato leaf miner (Tuta absoluta) associated with organophosphates resistance. J. Appl. Entomol. 141, 612â619 (2017).
Google ScholarÂ
Haddi, K. et al. Identification of mutations associated with pyrethroid resistance in the voltage-gated sodium channel of the tomato leaf miner (Tuta absoluta). Insect. Biochem. Mol. Biol. 42, 506â513 (2012).
Google ScholarÂ
Silva, W. M. et al. Mutation (G275E) of the nicotinic acetylcholine receptor α6 subunit is associated with high levels of resistance to spinosyns in Tuta absoluta (Meyrick) (Lepidoptera: Gelechiidae). Pestic. Biochem. Physiol. 131, 1â8 (2016).
Google ScholarÂ
Siqueira, H. A. A., Guedes, R. N. C. & Picanco, M. C. Cartap resistance and synergism in populations of Tuta absoluta (Lep., Gelechiidae). J. Appl. Entomol. 124, 233â238 (2000).
Google ScholarÂ
Silva, G. A. et al. Control failure likelihood and spatial dependence of insecticide resistance in the tomato pinworm, Tuta absoluta. Pest Manag. Sci. 67, 913â920 (2011).
Google ScholarÂ
Siqueira, H. A. A., Guedes, R. N. C., Fragoso, D. B. & Magalhaes, L. C. Abamectin resistance and synergism in Brazilian populations of Tuta absoluta (Meyrick) (Lepidoptera: Gelechiidae). Int. J. Pest Manag. 47, 247â251 (2001).
Google ScholarÂ
Roditakis, E. et al. Ryanodine receptor point mutations confer diamide insecticide resistance in tomato leafminer, Tuta absoluta (Lepidoptera: Gelechiidae). Insect. Biochem. Mol. Biol. 80, 11â20 (2017).
Google ScholarÂ
Davies, T. G. E., Field, L. M., Usherwood, P. N. R. & Williamson, M. S. DDT, pyrethrins, pyrethroids and insect sodium channels. IUBMB Life 59, 151â162 (2007).
Google ScholarÂ
Fournier, D. Mutations of acetylcholinesterase which confer insecticide resistance in insect populations. Chem. Biol. Interact. 157â158, 257â261 (2005).
Google ScholarÂ
Ishaaya, I. Biochemical sites of insecticide action and resistance. Biochem. Sites Insect. Action Resist. https://doi.org/10.1007/978-3-642-59549-3 (2001).
Google ScholarÂ
Elghar, G. E. A., Elbermawy, Z. A., Yousef, A. G. & Elhady, H. K. A. Monitoring and characterization of insecticide resistance in the Cotton Leafworm, Spodoptera littoralis (Boisd.) (Lepidoptera: Noctuidae). J. Asia Pac. Entomol. 8, 397â410 (2005).
Google ScholarÂ
Crow, J. F. Genetics of insect resistance to chemicals. Annu. Rev. Entomol. 2, 227â246 (1957).
Google ScholarÂ
Acquaah, G. Breeding selected crops. In Principles of Plant Genetics and Breeding (eds. Acquaah, G.) 667â678 (Wiley, 2012). https://doi.org/10.1002/9781118313718.
Silva, J. E., da Ribeiro, L. M. S., Vinasco, N., Guedes, R. N. C. & Siqueira, H. Ã. A. Field-evolved resistance to chlorantraniliprole in the tomato pinworm Tuta absoluta: Inheritance, cross-resistance profile, and metabolism. J. Pest Sci. (2004) 92, 1421â1431 (2019).
Google ScholarÂ
Barati, R., Hejazi, M. J. & Mohammadi, S. A. Insecticide susceptibility in Tuta absoluta (Lepidoptera: Gelechiidae ) and metabolic characterization of resistance to Diazinon. J. Econ. Entomol. 111, 1551â1557 (2018).
Google ScholarÂ
Silva, W. M. et al. Status of pyrethroid resistance and mechanisms in Brazilian populations of Tuta absoluta. Pestic. Biochem. Physiol. 122, 1â7 (2015).
Google ScholarÂ
Li, X., Schuler, M. A. & Berenbaum, M. R. Molecular mechanisms of metabolic resistance to synthetic and natural xenobiotics. Annu. Rev. Entomol. 52, 231â253 (2007).
Google ScholarÂ
Pavlidi, N., Vontas, J. & Van Leeuwen, T. The role of glutathione S-transferases (GSTs) in insecticide resistance in crop pests and disease vectors. Curr. Opin. Insect Sci. 27, 97â102 (2018).
Google ScholarÂ
Meng, J., Chen, X. & Zhang, C. Transcriptome-based identification and characterization of genes responding to imidacloprid in Myzus persicae. Sci. Rep. 9, 1â8 (2019).
Google ScholarÂ
Han, J. B., Li, G. Q., Wan, P. J., Zhu, T. T. & Meng, Q. W. Identification of glutathione S-transferase genes in Leptinotarsa decemlineata and their expression patterns under stress of three insecticides. Pestic. Biochem. Physiol. 133, 26â34 (2016).
Google ScholarÂ
Bautista, M. A. M. et al. Evidence for trade-offs in detoxification and chemosensation gene signatures in Plutella xylostella. Pest. Manag. Sci. 71, 423â432 (2015).
Google ScholarÂ
Agbessenou, A. et al. Endophytic fungi protect tomato and nightshade plants against Tuta absoluta (Lepidoptera: Gelechiidae) through a hidden friendship and cryptic battle. Sci. Rep. 10, 1â13 (2020).
Google ScholarÂ
PCPB. Pest Control Products Registered for Use in Kenya. 1â585 (2018).
Jalili, V. et al. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update. Nucleic Acids Res. 48, W395âW402 (2021).
Google ScholarÂ
Wick, R. & Volkening, J. Porechop: adapter trimmer for Oxford Nanopore reads. Github (2018).
Li, H. Minimap2: Pairwise alignment for nucleotide sequences. Bioinformatics 34, 3094â3100 (2018).
Google ScholarÂ
Pertea, M. et al. StringTie enables improved reconstruction of a transcriptome from RNA-seq reads. Nat. Biotechnol. 33, 290â295 (2015).
Google ScholarÂ
Love, M. I., Huber, W. & Anders, S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 15, 1â21 (2014).
Google ScholarÂ
Carver, T., Harris, S. R., Berriman, M., Parkhill, J. & McQuillan, J. A. Artemis: An integrated platform for visualization and analysis of high-throughput sequence-based experimental data. Bioinformatics 28, 464â469 (2012).
Google ScholarÂ
Götz, S. et al. High-throughput functional annotation and data mining with the Blast2GO suite. Nucleic Acids Res. 36, 3420â3435 (2008).
Google ScholarÂ
Ye, J. et al. Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction. BMC Bioinform. 13, 134 (2012).
Google ScholarÂ
Livak, K. J. & Schmittgen, T. D. Analysis of relative gene expression data using real-time quantitative PCR and the 2-ÎÎCT method. Methods 25, 402â408 (2001).
Google ScholarÂ
Haddi, K. et al. Identification of mutations associated with pyrethroid resistance in the voltage-gated sodium channel of the tomato leaf miner (Tuta absoluta). Insect Biochem. Mol. Biol. 42, 506â513 (2012).
Google ScholarÂ
Zibaee, I., Mahmood, K., Esmaeily, M., Bandani, A. R. & Kristensen, M. Organophosphate and pyrethroid resistances in the tomato leaf miner Tuta absoluta (Lepidoptera: Gelechiidae) from Iran. J. Appl. Entomol. 142, 181â191 (2018).
Google ScholarÂ
Yan, X., Zhang, Y., Xu, K., Wang, Y. & Yang, W. Selection and validation of reference genes for gene expression analysis in Tuta absoluta Meyrick (Lepidoptera: Gelechiidae). (2021) https://doi.org/10.3390/insects12070589.
Zheng, C. et al. Reference gene selection for expression analyses by qRT-PCR in Dendroctonus valens. https://doi.org/10.3390/insects11060328.